Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-2Q5R1I4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-2Q5R1I4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trav6-2Q5R1I4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Gm13146-201ENSMUST00000118508 780 ntBASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-2Q5R1I4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.1■□□□□ 0.33
Trav6-2Q5R1I4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-2Q5R1I4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-2Q5R1I4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-2Q5R1I4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-2Q5R1I4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Gm12441-201ENSMUST00000121806 588 ntBASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-2Q5R1I4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms