Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-4Q5R1I0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-4Q5R1I0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Gm42642-201ENSMUST00000200683 355 ntBASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Gm9988-201ENSMUST00000069786 435 ntBASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Trav6d-4Q5R1I0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gm42778-201ENSMUST00000199644 553 ntBASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-4Q5R1I0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-4Q5R1I0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-4Q5R1I0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-4Q5R1I0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-4Q5R1I0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-4Q5R1I0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-4Q5R1I0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6d-4Q5R1I0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Gm18671-201ENSMUST00000214826 683 ntBASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-4Q5R1I0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms