Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8d-1Q5R1H8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav8d-1Q5R1H8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8d-1Q5R1H8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8d-1Q5R1H8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav8d-1Q5R1H8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8d-1Q5R1H8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Trav8d-1Q5R1H8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav8d-1Q5R1H8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav8d-1Q5R1H8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Gm14117-201ENSMUST00000122417 843 ntBASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8d-1Q5R1H8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Rarb-207ENSMUST00000225921 2756 ntBASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8d-1Q5R1H8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8d-1Q5R1H8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms