Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf43Q5NCP0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf43Q5NCP0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Gm12527-201ENSMUST00000117967 564 ntBASIC19.83■□□□□ 0.77
Rnf43Q5NCP0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf43Q5NCP0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rnf43Q5NCP0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf43Q5NCP0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf43Q5NCP0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Gm13148-201ENSMUST00000118892 745 ntBASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf43Q5NCP0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf43Q5NCP0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf43Q5NCP0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf43Q5NCP0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Gm22240-201ENSMUST00000175225 82 ntBASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf43Q5NCP0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Gm8520-201ENSMUST00000186517 868 ntBASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf43Q5NCP0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf43Q5NCP0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf43Q5NCP0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf43Q5NCP0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms