Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf20Q5DTM8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf20Q5DTM8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf20Q5DTM8 Gm12821-201ENSMUST00000120022 600 ntBASIC23.14■■□□□ 1.29
Rnf20Q5DTM8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf20Q5DTM8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf20Q5DTM8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rnf20Q5DTM8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.12■■□□□ 1.29
Rnf20Q5DTM8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Serp2-204ENSMUST00000228055 705 ntBASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf20Q5DTM8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf20Q5DTM8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Gm12251-201ENSMUST00000117893 792 ntBASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf20Q5DTM8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf20Q5DTM8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf20Q5DTM8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf20Q5DTM8 Mir7075-201ENSMUST00000184187 82 ntBASIC23.08■■□□□ 1.29
Rnf20Q5DTM8 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.08■■□□□ 1.28
Rnf20Q5DTM8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf20Q5DTM8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf20Q5DTM8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf20Q5DTM8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms