Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Gm22325-201ENSMUST00000158904 308 ntBASIC17.9■□□□□ 0.46
Urb1Q571H0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.9■□□□□ 0.46
Urb1Q571H0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Urb1Q571H0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.89■□□□□ 0.46
Urb1Q571H0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Urb1Q571H0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.89■□□□□ 0.45
Urb1Q571H0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.89■□□□□ 0.45
Urb1Q571H0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Urb1Q571H0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Urb1Q571H0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Urb1Q571H0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Urb1Q571H0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Urb1Q571H0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.88■□□□□ 0.45
Urb1Q571H0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.88■□□□□ 0.45
Urb1Q571H0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Urb1Q571H0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Urb1Q571H0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Urb1Q571H0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Urb1Q571H0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Urb1Q571H0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.87■□□□□ 0.45
Urb1Q571H0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
Urb1Q571H0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.87■□□□□ 0.45
Urb1Q571H0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.87■□□□□ 0.45
Urb1Q571H0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Urb1Q571H0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Urb1Q571H0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Urb1Q571H0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Urb1Q571H0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.87■□□□□ 0.45
Urb1Q571H0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.87■□□□□ 0.45
Urb1Q571H0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Urb1Q571H0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Urb1Q571H0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Urb1Q571H0 Mir6982-201ENSMUST00000184354 68 ntBASIC17.86■□□□□ 0.45
Urb1Q571H0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.86■□□□□ 0.45
Urb1Q571H0 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.86■□□□□ 0.45
Urb1Q571H0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Urb1Q571H0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.86■□□□□ 0.45
Urb1Q571H0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Urb1Q571H0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Urb1Q571H0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Urb1Q571H0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Urb1Q571H0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Urb1Q571H0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Urb1Q571H0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Urb1Q571H0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Urb1Q571H0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.85■□□□□ 0.45
Urb1Q571H0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.85■□□□□ 0.45
Urb1Q571H0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.85■□□□□ 0.45
Urb1Q571H0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Urb1Q571H0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Urb1Q571H0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Urb1Q571H0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Urb1Q571H0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.84■□□□□ 0.45
Urb1Q571H0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Urb1Q571H0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Urb1Q571H0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Urb1Q571H0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.84■□□□□ 0.45
Urb1Q571H0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Urb1Q571H0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Urb1Q571H0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Urb1Q571H0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Urb1Q571H0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Urb1Q571H0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Urb1Q571H0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Urb1Q571H0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Urb1Q571H0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.83■□□□□ 0.45
Urb1Q571H0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Urb1Q571H0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Urb1Q571H0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Urb1Q571H0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.83■□□□□ 0.44
Urb1Q571H0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.83■□□□□ 0.44
Urb1Q571H0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.83■□□□□ 0.44
Urb1Q571H0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Urb1Q571H0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Urb1Q571H0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.82■□□□□ 0.44
Urb1Q571H0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Urb1Q571H0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Urb1Q571H0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.81■□□□□ 0.44
Urb1Q571H0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Urb1Q571H0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms