Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnga4Q3UW12 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cnga4Q3UW12 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnga4Q3UW12 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cnga4Q3UW12 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Mir6538-201ENSMUST00000183713 110 ntBASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.67■□□□□ 0.74
Cnga4Q3UW12 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cnga4Q3UW12 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cnga4Q3UW12 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cnga4Q3UW12 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms