Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa3Q3UPR0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Shisa3Q3UPR0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.78■□□□□ 0.28
Shisa3Q3UPR0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa3Q3UPR0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Shisa3Q3UPR0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.77■□□□□ 0.27
Shisa3Q3UPR0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa3Q3UPR0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa3Q3UPR0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shisa3Q3UPR0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Grk6-206ENSMUST00000224995 2971 ntBASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shisa3Q3UPR0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shisa3Q3UPR0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Shisa3Q3UPR0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Shisa3Q3UPR0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shisa3Q3UPR0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms