Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Naf1Q3UMQ8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Reep4-203ENSMUST00000226563 1444 ntBASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Naf1Q3UMQ8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.8■□□□□ 0.76
Naf1Q3UMQ8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Naf1Q3UMQ8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Naf1Q3UMQ8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Naf1Q3UMQ8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.77■□□□□ 0.76
Naf1Q3UMQ8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Naf1Q3UMQ8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Naf1Q3UMQ8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Naf1Q3UMQ8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.77■□□□□ 0.75
Naf1Q3UMQ8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Naf1Q3UMQ8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
Naf1Q3UMQ8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Naf1Q3UMQ8 AA386476-201ENSMUST00000098781 1665 ntBASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Naf1Q3UMQ8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Naf1Q3UMQ8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms