Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrk1Q3UHC2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrk1Q3UHC2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrk1Q3UHC2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Gm10033-202ENSMUST00000211874 928 ntBASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrrk1Q3UHC2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrrk1Q3UHC2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.09■□□□□ 0.49
Lrrk1Q3UHC2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Lrrk1Q3UHC2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrrk1Q3UHC2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lrrk1Q3UHC2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrrk1Q3UHC2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrrk1Q3UHC2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.08■□□□□ 0.48
Lrrk1Q3UHC2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.07■□□□□ 0.48
Lrrk1Q3UHC2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrrk1Q3UHC2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrrk1Q3UHC2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrk1Q3UHC2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrrk1Q3UHC2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Lrrk1Q3UHC2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms