Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Spg11Q3UHA3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Spg11Q3UHA3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Spg11Q3UHA3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.26■□□□□ 0.51
Spg11Q3UHA3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.25■□□□□ 0.51
Spg11Q3UHA3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Spg11Q3UHA3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Gm18666-201ENSMUST00000190039 958 ntBASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Spg11Q3UHA3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Spg11Q3UHA3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Gm5867-201ENSMUST00000063197 592 ntBASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Spg11Q3UHA3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Gm7461-201ENSMUST00000058918 827 ntBASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Spg11Q3UHA3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Spg11Q3UHA3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Spg11Q3UHA3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.17■□□□□ 0.5
Spg11Q3UHA3 Gm17971-201ENSMUST00000190239 806 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms