Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cul4aQ3TCH7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cul4aQ3TCH7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cul4aQ3TCH7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cul4aQ3TCH7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cul4aQ3TCH7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cul4aQ3TCH7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cul4aQ3TCH7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cul4aQ3TCH7 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.39■□□□□ 0.86
Cul4aQ3TCH7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cul4aQ3TCH7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.39■□□□□ 0.86
Cul4aQ3TCH7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cul4aQ3TCH7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.39■□□□□ 0.86
Cul4aQ3TCH7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.39■□□□□ 0.85
Cul4aQ3TCH7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cul4aQ3TCH7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.38■□□□□ 0.85
Cul4aQ3TCH7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cul4aQ3TCH7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cul4aQ3TCH7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms