Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm22238-201ENSMUST00000175222 88 ntBASIC19.12■□□□□ 0.65
Q3KNL4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Q3KNL4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.12■□□□□ 0.65
Q3KNL4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q3KNL4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Q3KNL4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Q3KNL4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.11■□□□□ 0.65
Q3KNL4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.11■□□□□ 0.65
Q3KNL4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Q3KNL4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q3KNL4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3KNL4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3KNL4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3KNL4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.1■□□□□ 0.65
Q3KNL4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q3KNL4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Q3KNL4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q3KNL4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q3KNL4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Q3KNL4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Q3KNL4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q3KNL4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Q3KNL4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.08■□□□□ 0.65
Q3KNL4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Q3KNL4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.08■□□□□ 0.65
Q3KNL4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Q3KNL4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.08■□□□□ 0.64
Q3KNL4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Q3KNL4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.08■□□□□ 0.64
Q3KNL4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3KNL4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.07■□□□□ 0.64
Q3KNL4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
Q3KNL4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Q3KNL4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.06■□□□□ 0.64
Q3KNL4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.06■□□□□ 0.64
Q3KNL4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3KNL4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.06■□□□□ 0.64
Q3KNL4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Q3KNL4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3KNL4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3KNL4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.06■□□□□ 0.64
Q3KNL4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Q3KNL4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Q3KNL4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Q3KNL4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Q3KNL4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Q3KNL4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Q3KNL4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.05■□□□□ 0.64
Q3KNL4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3KNL4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.04■□□□□ 0.64
Q3KNL4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.04■□□□□ 0.64
Q3KNL4 Rps24-207ENSMUST00000224568 714 ntBASIC19.04■□□□□ 0.64
Q3KNL4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Q3KNL4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Q3KNL4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3KNL4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Q3KNL4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.03■□□□□ 0.64
Q3KNL4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Q3KNL4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
Q3KNL4 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.02■□□□□ 0.64
Q3KNL4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms