Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.57□□□□□ -0.08
Hspg2Q05793 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.57□□□□□ -0.08
Hspg2Q05793 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hspg2Q05793 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hspg2Q05793 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.57□□□□□ -0.08
Hspg2Q05793 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.57□□□□□ -0.08
Hspg2Q05793 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hspg2Q05793 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.57□□□□□ -0.08
Hspg2Q05793 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hspg2Q05793 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hspg2Q05793 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.56□□□□□ -0.08
Hspg2Q05793 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hspg2Q05793 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.55□□□□□ -0.08
Hspg2Q05793 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.55□□□□□ -0.08
Hspg2Q05793 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.55□□□□□ -0.08
Hspg2Q05793 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hspg2Q05793 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.54□□□□□ -0.08
Hspg2Q05793 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hspg2Q05793 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.54□□□□□ -0.08
Hspg2Q05793 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.54□□□□□ -0.08
Hspg2Q05793 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hspg2Q05793 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Gm13534-201ENSMUST00000121169 513 ntBASIC14.54□□□□□ -0.08
Hspg2Q05793 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.54□□□□□ -0.08
Hspg2Q05793 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.54□□□□□ -0.08
Hspg2Q05793 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hspg2Q05793 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hspg2Q05793 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hspg2Q05793 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hspg2Q05793 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hspg2Q05793 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hspg2Q05793 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Hspg2Q05793 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hspg2Q05793 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.53□□□□□ -0.08
Hspg2Q05793 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.53□□□□□ -0.08
Hspg2Q05793 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hspg2Q05793 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hspg2Q05793 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.52□□□□□ -0.08
Hspg2Q05793 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hspg2Q05793 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hspg2Q05793 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hspg2Q05793 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hspg2Q05793 Gm10819-201ENSMUST00000099988 561 ntBASIC14.52□□□□□ -0.09
Hspg2Q05793 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hspg2Q05793 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hspg2Q05793 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hspg2Q05793 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.52□□□□□ -0.09
Hspg2Q05793 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Hspg2Q05793 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms