Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 Gm10033-202ENSMUST00000211874 928 ntBASIC20.33■□□□□ 0.85
IhhP97812 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IhhP97812 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IhhP97812 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IhhP97812 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
IhhP97812 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IhhP97812 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 Gm10849-201ENSMUST00000100397 618 ntBASIC20.32■□□□□ 0.84
IhhP97812 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
IhhP97812 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IhhP97812 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
IhhP97812 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.31■□□□□ 0.84
IhhP97812 Reep4-203ENSMUST00000226563 1444 ntBASIC20.31■□□□□ 0.84
IhhP97812 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.31■□□□□ 0.84
IhhP97812 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.31■□□□□ 0.84
IhhP97812 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IhhP97812 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.31■□□□□ 0.84
IhhP97812 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IhhP97812 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IhhP97812 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IhhP97812 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IhhP97812 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IhhP97812 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IhhP97812 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
IhhP97812 Gm42642-201ENSMUST00000200683 355 ntBASIC20.3■□□□□ 0.84
IhhP97812 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
IhhP97812 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IhhP97812 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.3■□□□□ 0.84
IhhP97812 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IhhP97812 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IhhP97812 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
IhhP97812 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IhhP97812 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.28■□□□□ 0.84
IhhP97812 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
IhhP97812 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IhhP97812 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
IhhP97812 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
IhhP97812 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
IhhP97812 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.27■□□□□ 0.84
IhhP97812 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.27■□□□□ 0.84
IhhP97812 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Gm9988-201ENSMUST00000069786 435 ntBASIC20.27■□□□□ 0.84
IhhP97812 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IhhP97812 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
IhhP97812 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IhhP97812 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.26■□□□□ 0.83
IhhP97812 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IhhP97812 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
IhhP97812 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IhhP97812 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.25■□□□□ 0.83
IhhP97812 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IhhP97812 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
IhhP97812 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.24■□□□□ 0.83
IhhP97812 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IhhP97812 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
IhhP97812 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IhhP97812 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IhhP97812 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms