Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Taf1aP97357 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Taf1aP97357 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.92■□□□□ 0.46
Taf1aP97357 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Taf1aP97357 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.91■□□□□ 0.46
Taf1aP97357 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.91■□□□□ 0.46
Taf1aP97357 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.91■□□□□ 0.46
Taf1aP97357 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Taf1aP97357 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Taf1aP97357 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.9■□□□□ 0.46
Taf1aP97357 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Taf1aP97357 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.9■□□□□ 0.46
Taf1aP97357 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Taf1aP97357 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Taf1aP97357 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Taf1aP97357 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Taf1aP97357 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Taf1aP97357 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Taf1aP97357 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Taf1aP97357 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Taf1aP97357 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Taf1aP97357 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.89■□□□□ 0.45
Taf1aP97357 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Taf1aP97357 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Taf1aP97357 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Taf1aP97357 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Taf1aP97357 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.88■□□□□ 0.45
Taf1aP97357 Gm7417-201ENSMUST00000192950 473 ntBASIC17.88■□□□□ 0.45
Taf1aP97357 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Taf1aP97357 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Taf1aP97357 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.87■□□□□ 0.45
Taf1aP97357 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Taf1aP97357 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Taf1aP97357 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Taf1aP97357 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Gm14117-201ENSMUST00000122417 843 ntBASIC17.86■□□□□ 0.45
Taf1aP97357 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.86■□□□□ 0.45
Taf1aP97357 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Taf1aP97357 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.85■□□□□ 0.45
Taf1aP97357 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Taf1aP97357 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Taf1aP97357 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Taf1aP97357 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.84■□□□□ 0.45
Taf1aP97357 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Taf1aP97357 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Taf1aP97357 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms