Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43bP86448 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim43bP86448 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim43bP86448 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43bP86448 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim43bP86448 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.91■□□□□ 0.78
Trim43bP86448 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim43bP86448 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Trim43bP86448 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim43bP86448 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43bP86448 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim43bP86448 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43bP86448 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim43bP86448 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim43bP86448 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim43bP86448 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim43bP86448 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim43bP86448 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Trim43bP86448 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trim43bP86448 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43bP86448 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim43bP86448 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43bP86448 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43bP86448 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43bP86448 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim43bP86448 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.88■□□□□ 0.77
Trim43bP86448 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim43bP86448 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43bP86448 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim43bP86448 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.87■□□□□ 0.77
Trim43bP86448 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43bP86448 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim43bP86448 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43bP86448 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim43bP86448 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.86■□□□□ 0.77
Trim43bP86448 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43bP86448 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim43bP86448 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trim43bP86448 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim43bP86448 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43bP86448 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43bP86448 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43bP86448 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim43bP86448 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim43bP86448 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43bP86448 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.84■□□□□ 0.77
Trim43bP86448 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim43bP86448 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43bP86448 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Trim43bP86448 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43bP86448 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43bP86448 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43bP86448 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms