Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vgll3P85442 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vgll3P85442 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vgll3P85442 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vgll3P85442 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.82■□□□□ 0.76
Vgll3P85442 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vgll3P85442 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vgll3P85442 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Vgll3P85442 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vgll3P85442 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vgll3P85442 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Vgll3P85442 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.82■□□□□ 0.76
Vgll3P85442 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vgll3P85442 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Vgll3P85442 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vgll3P85442 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Vgll3P85442 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.81■□□□□ 0.76
Vgll3P85442 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vgll3P85442 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vgll3P85442 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vgll3P85442 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.8■□□□□ 0.76
Vgll3P85442 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vgll3P85442 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vgll3P85442 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vgll3P85442 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.79■□□□□ 0.76
Vgll3P85442 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vgll3P85442 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vgll3P85442 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.78■□□□□ 0.76
Vgll3P85442 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.78■□□□□ 0.76
Vgll3P85442 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vgll3P85442 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vgll3P85442 Dancr-204ENSMUST00000132389 2347 ntBASIC19.78■□□□□ 0.76
Vgll3P85442 Gm11599-201ENSMUST00000118720 878 ntBASIC19.78■□□□□ 0.76
Vgll3P85442 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.78■□□□□ 0.76
Vgll3P85442 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vgll3P85442 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vgll3P85442 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.78■□□□□ 0.76
Vgll3P85442 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vgll3P85442 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vgll3P85442 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.77■□□□□ 0.76
Vgll3P85442 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vgll3P85442 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vgll3P85442 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Vgll3P85442 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vgll3P85442 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vgll3P85442 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Vgll3P85442 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Vgll3P85442 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vgll3P85442 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Vgll3P85442 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vgll3P85442 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Vgll3P85442 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vgll3P85442 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vgll3P85442 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.75■□□□□ 0.75
Vgll3P85442 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vgll3P85442 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vgll3P85442 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC19.74■□□□□ 0.75
Vgll3P85442 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vgll3P85442 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Vgll3P85442 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.74■□□□□ 0.75
Vgll3P85442 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Vgll3P85442 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vgll3P85442 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms