Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcdP82347 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SgcdP82347 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.89■□□□□ 0.45
SgcdP82347 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SgcdP82347 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SgcdP82347 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.89■□□□□ 0.45
SgcdP82347 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SgcdP82347 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
SgcdP82347 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SgcdP82347 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SgcdP82347 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.88■□□□□ 0.45
SgcdP82347 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.88■□□□□ 0.45
SgcdP82347 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.88■□□□□ 0.45
SgcdP82347 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SgcdP82347 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcdP82347 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
SgcdP82347 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SgcdP82347 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcdP82347 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SgcdP82347 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SgcdP82347 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.86■□□□□ 0.45
SgcdP82347 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SgcdP82347 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SgcdP82347 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SgcdP82347 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcdP82347 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SgcdP82347 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SgcdP82347 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcdP82347 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.84■□□□□ 0.45
SgcdP82347 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SgcdP82347 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcdP82347 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SgcdP82347 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcdP82347 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcdP82347 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcdP82347 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcdP82347 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.83■□□□□ 0.44
SgcdP82347 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.83■□□□□ 0.44
SgcdP82347 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcdP82347 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcdP82347 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SgcdP82347 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcdP82347 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcdP82347 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.82■□□□□ 0.44
SgcdP82347 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms