Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CiitaP79621 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.19■□□□□ 0.98
CiitaP79621 Gm18671-201ENSMUST00000214826 683 ntBASIC21.19■□□□□ 0.98
CiitaP79621 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CiitaP79621 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CiitaP79621 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CiitaP79621 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CiitaP79621 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.18■□□□□ 0.98
CiitaP79621 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Gm13234-201ENSMUST00000120010 747 ntBASIC21.18■□□□□ 0.98
CiitaP79621 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Gm42778-201ENSMUST00000199644 553 ntBASIC21.18■□□□□ 0.98
CiitaP79621 AV356131-201ENSMUST00000206201 750 ntBASIC21.18■□□□□ 0.98
CiitaP79621 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.18■□□□□ 0.98
CiitaP79621 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CiitaP79621 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CiitaP79621 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CiitaP79621 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.17■□□□□ 0.98
CiitaP79621 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CiitaP79621 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CiitaP79621 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CiitaP79621 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CiitaP79621 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.16■□□□□ 0.98
CiitaP79621 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CiitaP79621 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CiitaP79621 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CiitaP79621 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CiitaP79621 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.15■□□□□ 0.98
CiitaP79621 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
CiitaP79621 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.15■□□□□ 0.98
CiitaP79621 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.15■□□□□ 0.98
CiitaP79621 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CiitaP79621 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CiitaP79621 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.15■□□□□ 0.98
CiitaP79621 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CiitaP79621 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.14■□□□□ 0.98
CiitaP79621 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CiitaP79621 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CiitaP79621 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.13■□□□□ 0.97
CiitaP79621 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CiitaP79621 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CiitaP79621 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CiitaP79621 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.13■□□□□ 0.97
CiitaP79621 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CiitaP79621 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
CiitaP79621 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CiitaP79621 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.12■□□□□ 0.97
CiitaP79621 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.12■□□□□ 0.97
CiitaP79621 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CiitaP79621 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CiitaP79621 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.11■□□□□ 0.97
CiitaP79621 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
CiitaP79621 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CiitaP79621 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CiitaP79621 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CiitaP79621 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CiitaP79621 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CiitaP79621 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms