Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.25■□□□□ 0.99
Irf3P70671 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.25■□□□□ 0.99
Irf3P70671 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf3P70671 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Irf3P70671 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.24■□□□□ 0.99
Irf3P70671 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Irf3P70671 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Irf3P70671 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.23■□□□□ 0.99
Irf3P70671 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.23■□□□□ 0.99
Irf3P70671 Gm38205-201ENSMUST00000192243 258 ntBASIC21.23■□□□□ 0.99
Irf3P70671 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.23■□□□□ 0.99
Irf3P70671 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.23■□□□□ 0.99
Irf3P70671 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf3P70671 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Irf3P70671 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Irf3P70671 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Irf3P70671 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.22■□□□□ 0.99
Irf3P70671 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.22■□□□□ 0.99
Irf3P70671 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Irf3P70671 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.22■□□□□ 0.99
Irf3P70671 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Irf3P70671 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Irf3P70671 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf3P70671 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf3P70671 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf3P70671 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Irf3P70671 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
Irf3P70671 Gm7514-201ENSMUST00000209475 934 ntBASIC21.2■□□□□ 0.98
Irf3P70671 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf3P70671 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf3P70671 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.19■□□□□ 0.98
Irf3P70671 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf3P70671 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Irf3P70671 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.18■□□□□ 0.98
Irf3P70671 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.17■□□□□ 0.98
Irf3P70671 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.17■□□□□ 0.98
Irf3P70671 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Irf3P70671 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.17■□□□□ 0.98
Irf3P70671 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Irf3P70671 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.17■□□□□ 0.98
Irf3P70671 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Irf3P70671 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Irf3P70671 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Irf3P70671 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Irf3P70671 Gm7860-201ENSMUST00000121190 879 ntBASIC21.16■□□□□ 0.98
Irf3P70671 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Irf3P70671 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.16■□□□□ 0.98
Irf3P70671 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf3P70671 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Irf3P70671 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Irf3P70671 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf3P70671 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Irf3P70671 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Irf3P70671 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Irf3P70671 Gm12933-201ENSMUST00000120203 872 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms