Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.37■□□□□ 0.69
Ldb1P70662 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ldb1P70662 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ldb1P70662 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.36■□□□□ 0.69
Ldb1P70662 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ldb1P70662 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ldb1P70662 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Ldb1P70662 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.35■□□□□ 0.69
Ldb1P70662 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ldb1P70662 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.35■□□□□ 0.69
Ldb1P70662 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ldb1P70662 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.34■□□□□ 0.69
Ldb1P70662 Spcs1-204ENSMUST00000226782 949 ntBASIC19.34■□□□□ 0.69
Ldb1P70662 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ldb1P70662 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ldb1P70662 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ldb1P70662 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.33■□□□□ 0.69
Ldb1P70662 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ldb1P70662 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ldb1P70662 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.33■□□□□ 0.68
Ldb1P70662 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ldb1P70662 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ldb1P70662 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ldb1P70662 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.32■□□□□ 0.68
Ldb1P70662 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Gm27454-201ENSMUST00000185090 204 ntBASIC19.32■□□□□ 0.68
Ldb1P70662 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.32■□□□□ 0.68
Ldb1P70662 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ldb1P70662 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ldb1P70662 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb1P70662 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb1P70662 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.31■□□□□ 0.68
Ldb1P70662 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Ldb1P70662 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Ldb1P70662 Mir7075-201ENSMUST00000184187 82 ntBASIC19.31■□□□□ 0.68
Ldb1P70662 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.31■□□□□ 0.68
Ldb1P70662 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb1P70662 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb1P70662 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ldb1P70662 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.3■□□□□ 0.68
Ldb1P70662 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.3■□□□□ 0.68
Ldb1P70662 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ldb1P70662 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ldb1P70662 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ldb1P70662 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.29■□□□□ 0.68
Ldb1P70662 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ldb1P70662 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb1P70662 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb1P70662 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.29■□□□□ 0.68
Ldb1P70662 Serp2-204ENSMUST00000228055 705 ntBASIC19.29■□□□□ 0.68
Ldb1P70662 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb1P70662 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb1P70662 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ldb1P70662 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ldb1P70662 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Gm45417-201ENSMUST00000209533 758 ntBASIC19.28■□□□□ 0.68
Ldb1P70662 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.28■□□□□ 0.68
Ldb1P70662 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Ldb1P70662 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ldb1P70662 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms