Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.34■□□□□ 0.69
Shox2P70390 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shox2P70390 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shox2P70390 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Shox2P70390 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shox2P70390 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shox2P70390 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shox2P70390 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Shox2P70390 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Shox2P70390 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shox2P70390 Gm11687-201ENSMUST00000118911 886 ntBASIC19.33■□□□□ 0.68
Shox2P70390 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shox2P70390 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shox2P70390 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shox2P70390 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Shox2P70390 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shox2P70390 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.3■□□□□ 0.68
Shox2P70390 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.3■□□□□ 0.68
Shox2P70390 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shox2P70390 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Shox2P70390 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.29■□□□□ 0.68
Shox2P70390 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.29■□□□□ 0.68
Shox2P70390 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.29■□□□□ 0.68
Shox2P70390 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shox2P70390 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.29■□□□□ 0.68
Shox2P70390 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shox2P70390 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shox2P70390 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shox2P70390 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Shox2P70390 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Shox2P70390 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shox2P70390 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shox2P70390 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Shox2P70390 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.28■□□□□ 0.68
Shox2P70390 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.27■□□□□ 0.68
Shox2P70390 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shox2P70390 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shox2P70390 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.27■□□□□ 0.68
Shox2P70390 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.27■□□□□ 0.68
Shox2P70390 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shox2P70390 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shox2P70390 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shox2P70390 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Shox2P70390 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
Shox2P70390 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shox2P70390 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms