Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Crnkl1P63154 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Crnkl1P63154 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crnkl1P63154 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.15■□□□□ 0.66
Crnkl1P63154 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crnkl1P63154 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.14■□□□□ 0.66
Crnkl1P63154 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Crnkl1P63154 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Crnkl1P63154 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Crnkl1P63154 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Crnkl1P63154 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Crnkl1P63154 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.13■□□□□ 0.65
Crnkl1P63154 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crnkl1P63154 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Crnkl1P63154 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.12■□□□□ 0.65
Crnkl1P63154 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crnkl1P63154 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.11■□□□□ 0.65
Crnkl1P63154 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.11■□□□□ 0.65
Crnkl1P63154 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Crnkl1P63154 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Crnkl1P63154 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Crnkl1P63154 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.1■□□□□ 0.65
Crnkl1P63154 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crnkl1P63154 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crnkl1P63154 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Crnkl1P63154 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Crnkl1P63154 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Crnkl1P63154 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.08■□□□□ 0.65
Crnkl1P63154 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Crnkl1P63154 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms