Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.61■□□□□ 0.73
ThraP63058 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.61■□□□□ 0.73
ThraP63058 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ThraP63058 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.61■□□□□ 0.73
ThraP63058 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ThraP63058 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.61■□□□□ 0.73
ThraP63058 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.6■□□□□ 0.73
ThraP63058 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 Spcs1-204ENSMUST00000226782 949 ntBASIC19.6■□□□□ 0.73
ThraP63058 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ThraP63058 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ThraP63058 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ThraP63058 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ThraP63058 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ThraP63058 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ThraP63058 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ThraP63058 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ThraP63058 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ThraP63058 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ThraP63058 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ThraP63058 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ThraP63058 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
ThraP63058 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.57■□□□□ 0.72
ThraP63058 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ThraP63058 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.57■□□□□ 0.72
ThraP63058 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ThraP63058 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.56■□□□□ 0.72
ThraP63058 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.56■□□□□ 0.72
ThraP63058 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ThraP63058 Gm5874-201ENSMUST00000096101 508 ntBASIC19.56■□□□□ 0.72
ThraP63058 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ThraP63058 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.56■□□□□ 0.72
ThraP63058 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ThraP63058 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ThraP63058 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.55■□□□□ 0.72
ThraP63058 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ThraP63058 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
ThraP63058 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ThraP63058 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ThraP63058 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
ThraP63058 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ThraP63058 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ThraP63058 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Gm26833-201ENSMUST00000180899 440 ntBASIC19.54■□□□□ 0.72
ThraP63058 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.54■□□□□ 0.72
ThraP63058 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.54■□□□□ 0.72
ThraP63058 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ThraP63058 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
ThraP63058 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.53■□□□□ 0.72
ThraP63058 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ThraP63058 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ThraP63058 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ThraP63058 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.53■□□□□ 0.72
ThraP63058 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.53■□□□□ 0.72
ThraP63058 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ThraP63058 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ThraP63058 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ThraP63058 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ThraP63058 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.52■□□□□ 0.72
ThraP63058 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ThraP63058 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.52■□□□□ 0.72
ThraP63058 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ThraP63058 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.52■□□□□ 0.72
ThraP63058 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ThraP63058 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ThraP63058 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms