Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ybx1P62960 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ybx1P62960 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ybx1P62960 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.01■□□□□ 0.79
Ybx1P62960 Mir5133-201ENSMUST00000174955 77 ntBASIC20.01■□□□□ 0.79
Ybx1P62960 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.01■□□□□ 0.79
Ybx1P62960 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.01■□□□□ 0.79
Ybx1P62960 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.01■□□□□ 0.79
Ybx1P62960 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.01■□□□□ 0.79
Ybx1P62960 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ybx1P62960 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ybx1P62960 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.01■□□□□ 0.79
Ybx1P62960 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Ybx1P62960 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ybx1P62960 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Ybx1P62960 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ybx1P62960 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ybx1P62960 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ybx1P62960 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ybx1P62960 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.99■□□□□ 0.79
Ybx1P62960 Gm12441-201ENSMUST00000121806 588 ntBASIC19.99■□□□□ 0.79
Ybx1P62960 Gm10653-202ENSMUST00000139570 835 ntBASIC19.99■□□□□ 0.79
Ybx1P62960 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Ybx1P62960 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ybx1P62960 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Ybx1P62960 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.98■□□□□ 0.79
Ybx1P62960 Gm38205-201ENSMUST00000192243 258 ntBASIC19.98■□□□□ 0.79
Ybx1P62960 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.98■□□□□ 0.79
Ybx1P62960 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ybx1P62960 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Gm13146-201ENSMUST00000118508 780 ntBASIC19.97■□□□□ 0.79
Ybx1P62960 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.97■□□□□ 0.79
Ybx1P62960 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ybx1P62960 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ybx1P62960 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.97■□□□□ 0.79
Ybx1P62960 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ybx1P62960 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ybx1P62960 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ybx1P62960 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ybx1P62960 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ybx1P62960 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.96■□□□□ 0.79
Ybx1P62960 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ybx1P62960 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ybx1P62960 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ybx1P62960 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ybx1P62960 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Gm4968-201ENSMUST00000071458 858 ntBASIC19.95■□□□□ 0.78
Ybx1P62960 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.95■□□□□ 0.78
Ybx1P62960 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.95■□□□□ 0.78
Ybx1P62960 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.95■□□□□ 0.78
Ybx1P62960 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ybx1P62960 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ybx1P62960 Nespas-201ENSMUST00000143738 1083 ntBASIC19.94■□□□□ 0.78
Ybx1P62960 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ybx1P62960 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ybx1P62960 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms