Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn18P56857 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cldn18P56857 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn18P56857 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn18P56857 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn18P56857 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn18P56857 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn18P56857 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn18P56857 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn18P56857 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn18P56857 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cldn18P56857 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn18P56857 Gm43060-201ENSMUST00000200621 289 ntBASIC17.45■□□□□ 0.38
Cldn18P56857 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.45■□□□□ 0.38
Cldn18P56857 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn18P56857 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn18P56857 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn18P56857 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn18P56857 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cldn18P56857 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Cldn18P56857 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.44■□□□□ 0.38
Cldn18P56857 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.44■□□□□ 0.38
Cldn18P56857 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn18P56857 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn18P56857 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn18P56857 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn18P56857 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn18P56857 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.43■□□□□ 0.38
Cldn18P56857 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn18P56857 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn18P56857 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn18P56857 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn18P56857 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn18P56857 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn18P56857 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn18P56857 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn18P56857 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn18P56857 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Cldn18P56857 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Cldn18P56857 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn18P56857 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn18P56857 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cldn18P56857 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn18P56857 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn18P56857 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldn18P56857 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldn18P56857 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn18P56857 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms