Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Smad6-203ENSMUST00000179458 273 ntBASIC19.52■□□□□ 0.72
Lim2P56563 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lim2P56563 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lim2P56563 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lim2P56563 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Lim2P56563 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lim2P56563 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.52■□□□□ 0.71
Lim2P56563 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.51■□□□□ 0.71
Lim2P56563 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lim2P56563 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lim2P56563 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Lim2P56563 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lim2P56563 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lim2P56563 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Lim2P56563 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.51■□□□□ 0.71
Lim2P56563 Gm26833-201ENSMUST00000180899 440 ntBASIC19.51■□□□□ 0.71
Lim2P56563 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.51■□□□□ 0.71
Lim2P56563 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lim2P56563 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lim2P56563 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Lim2P56563 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lim2P56563 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lim2P56563 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lim2P56563 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lim2P56563 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Lim2P56563 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Lim2P56563 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Lim2P56563 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lim2P56563 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Lim2P56563 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lim2P56563 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lim2P56563 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lim2P56563 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lim2P56563 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lim2P56563 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lim2P56563 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lim2P56563 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lim2P56563 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lim2P56563 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.46■□□□□ 0.71
Lim2P56563 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.46■□□□□ 0.71
Lim2P56563 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lim2P56563 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lim2P56563 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lim2P56563 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lim2P56563 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lim2P56563 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Lim2P56563 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.45■□□□□ 0.7
Lim2P56563 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Lim2P56563 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.45■□□□□ 0.7
Lim2P56563 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lim2P56563 Gm40848-201ENSMUST00000221998 324 ntBASIC19.45■□□□□ 0.7
Lim2P56563 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lim2P56563 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lim2P56563 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lim2P56563 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lim2P56563 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.44■□□□□ 0.7
Lim2P56563 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.44■□□□□ 0.7
Lim2P56563 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lim2P56563 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lim2P56563 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lim2P56563 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lim2P56563 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lim2P56563 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lim2P56563 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lim2P56563 Gm11421-201ENSMUST00000122124 294 ntBASIC19.42■□□□□ 0.7
Lim2P56563 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Lim2P56563 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.42■□□□□ 0.7
Lim2P56563 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lim2P56563 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.42■□□□□ 0.7
Lim2P56563 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lim2P56563 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lim2P56563 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.42■□□□□ 0.7
Lim2P56563 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lim2P56563 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Lim2P56563 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lim2P56563 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Lim2P56563 Gm43060-201ENSMUST00000200621 289 ntBASIC19.41■□□□□ 0.7
Lim2P56563 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms