Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lhx4P53776 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Lhx4P53776 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.39■□□□□ 0.21
Lhx4P53776 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.39■□□□□ 0.21
Lhx4P53776 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.39■□□□□ 0.21
Lhx4P53776 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Lhx4P53776 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx4P53776 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx4P53776 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx4P53776 Mir7075-201ENSMUST00000184187 82 ntBASIC16.38■□□□□ 0.21
Lhx4P53776 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx4P53776 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Lhx4P53776 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lhx4P53776 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.37■□□□□ 0.21
Lhx4P53776 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.37■□□□□ 0.21
Lhx4P53776 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.37■□□□□ 0.21
Lhx4P53776 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.37■□□□□ 0.21
Lhx4P53776 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lhx4P53776 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lhx4P53776 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lhx4P53776 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.37■□□□□ 0.21
Lhx4P53776 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
Lhx4P53776 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx4P53776 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Lhx4P53776 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.36■□□□□ 0.21
Lhx4P53776 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lhx4P53776 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.36■□□□□ 0.21
Lhx4P53776 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx4P53776 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Serp2-204ENSMUST00000228055 705 ntBASIC16.35■□□□□ 0.21
Lhx4P53776 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lhx4P53776 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lhx4P53776 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx4P53776 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx4P53776 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.34■□□□□ 0.21
Lhx4P53776 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lhx4P53776 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.34■□□□□ 0.21
Lhx4P53776 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Lhx4P53776 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx4P53776 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx4P53776 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx4P53776 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lhx4P53776 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx4P53776 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lhx4P53776 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx4P53776 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx4P53776 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx4P53776 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.33■□□□□ 0.2
Lhx4P53776 Gm6139-201ENSMUST00000079261 882 ntBASIC16.33■□□□□ 0.2
Lhx4P53776 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
Lhx4P53776 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx4P53776 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lhx4P53776 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lhx4P53776 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lhx4P53776 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Lhx4P53776 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lhx4P53776 Gm8493-201ENSMUST00000196881 489 ntBASIC16.32■□□□□ 0.2
Lhx4P53776 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms