Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Notumos-201ENSMUST00000151998 2659 ntBASIC19.28■□□□□ 0.68
Pdx1P52946 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pdx1P52946 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.28■□□□□ 0.68
Pdx1P52946 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pdx1P52946 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdx1P52946 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Pdx1P52946 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pdx1P52946 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdx1P52946 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdx1P52946 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.27■□□□□ 0.68
Pdx1P52946 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Pdx1P52946 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdx1P52946 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdx1P52946 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdx1P52946 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdx1P52946 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdx1P52946 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.26■□□□□ 0.67
Pdx1P52946 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.26■□□□□ 0.67
Pdx1P52946 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdx1P52946 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pdx1P52946 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Pdx1P52946 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pdx1P52946 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdx1P52946 Golph3-202ENSMUST00000226517 2359 ntBASIC19.25■□□□□ 0.67
Pdx1P52946 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.24■□□□□ 0.67
Pdx1P52946 Gm40848-201ENSMUST00000221998 324 ntBASIC19.24■□□□□ 0.67
Pdx1P52946 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdx1P52946 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdx1P52946 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdx1P52946 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdx1P52946 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdx1P52946 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pdx1P52946 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdx1P52946 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdx1P52946 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdx1P52946 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.23■□□□□ 0.67
Pdx1P52946 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Gm11421-201ENSMUST00000122124 294 ntBASIC19.22■□□□□ 0.67
Pdx1P52946 Gm26833-201ENSMUST00000180899 440 ntBASIC19.22■□□□□ 0.67
Pdx1P52946 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pdx1P52946 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdx1P52946 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.22■□□□□ 0.67
Pdx1P52946 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pdx1P52946 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.21■□□□□ 0.67
Pdx1P52946 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pdx1P52946 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdx1P52946 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pdx1P52946 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Pdx1P52946 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.2■□□□□ 0.66
Pdx1P52946 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pdx1P52946 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdx1P52946 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdx1P52946 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pdx1P52946 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms