Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn3P51791 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.24■□□□□ 0.99
Clcn3P51791 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn3P51791 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.24■□□□□ 0.99
Clcn3P51791 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Clcn3P51791 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn3P51791 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Clcn3P51791 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.23■□□□□ 0.99
Clcn3P51791 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.23■□□□□ 0.99
Clcn3P51791 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.23■□□□□ 0.99
Clcn3P51791 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn3P51791 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.22■□□□□ 0.99
Clcn3P51791 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.22■□□□□ 0.99
Clcn3P51791 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.22■□□□□ 0.99
Clcn3P51791 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn3P51791 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.21■□□□□ 0.99
Clcn3P51791 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.21■□□□□ 0.99
Clcn3P51791 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn3P51791 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Clcn3P51791 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Clcn3P51791 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn3P51791 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.2■□□□□ 0.98
Clcn3P51791 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn3P51791 Gm38205-201ENSMUST00000192243 258 ntBASIC21.2■□□□□ 0.98
Clcn3P51791 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.2■□□□□ 0.98
Clcn3P51791 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn3P51791 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn3P51791 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn3P51791 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Clcn3P51791 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn3P51791 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Clcn3P51791 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Clcn3P51791 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Gm7514-201ENSMUST00000209475 934 ntBASIC21.19■□□□□ 0.98
Clcn3P51791 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn3P51791 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn3P51791 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn3P51791 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn3P51791 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn3P51791 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn3P51791 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn3P51791 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clcn3P51791 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Clcn3P51791 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn3P51791 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms