Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm5812-201ENSMUST00000061073 957 ntBASIC19.28■□□□□ 0.68
Krt6aP50446 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt6aP50446 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Krt6aP50446 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt6aP50446 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt6aP50446 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
Krt6aP50446 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Krt6aP50446 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt6aP50446 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt6aP50446 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.27■□□□□ 0.68
Krt6aP50446 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.27■□□□□ 0.68
Krt6aP50446 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Krt6aP50446 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt6aP50446 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt6aP50446 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Krt6aP50446 AA386476-201ENSMUST00000098781 1665 ntBASIC19.27■□□□□ 0.67
Krt6aP50446 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Krt6aP50446 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Krt6aP50446 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt6aP50446 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.25■□□□□ 0.67
Krt6aP50446 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Krt6aP50446 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Krt6aP50446 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Golph3-205ENSMUST00000228671 2842 ntBASIC19.25■□□□□ 0.67
Krt6aP50446 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.25■□□□□ 0.67
Krt6aP50446 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.25■□□□□ 0.67
Krt6aP50446 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Krt6aP50446 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
Krt6aP50446 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt6aP50446 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt6aP50446 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Krt6aP50446 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Krt6aP50446 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.24■□□□□ 0.67
Krt6aP50446 Gm15546-201ENSMUST00000122095 826 ntBASIC19.24■□□□□ 0.67
Krt6aP50446 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt6aP50446 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt6aP50446 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Krt6aP50446 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Krt6aP50446 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Krt6aP50446 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Krt6aP50446 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Krt6aP50446 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Krt6aP50446 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Krt6aP50446 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt6aP50446 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.22■□□□□ 0.67
Krt6aP50446 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt6aP50446 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt6aP50446 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt6aP50446 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt6aP50446 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt6aP50446 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt6aP50446 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt6aP50446 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt6aP50446 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Krt6aP50446 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt6aP50446 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.2■□□□□ 0.66
Krt6aP50446 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt6aP50446 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt6aP50446 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Krt6aP50446 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms