Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hnf4aP49698 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hnf4aP49698 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hnf4aP49698 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hnf4aP49698 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Hnf4aP49698 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Hnf4aP49698 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.78■□□□□ 0.6
Hnf4aP49698 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hnf4aP49698 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hnf4aP49698 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hnf4aP49698 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hnf4aP49698 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hnf4aP49698 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hnf4aP49698 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hnf4aP49698 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hnf4aP49698 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hnf4aP49698 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hnf4aP49698 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.76■□□□□ 0.59
Hnf4aP49698 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hnf4aP49698 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hnf4aP49698 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hnf4aP49698 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.76■□□□□ 0.59
Hnf4aP49698 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hnf4aP49698 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hnf4aP49698 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hnf4aP49698 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hnf4aP49698 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.75■□□□□ 0.59
Hnf4aP49698 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.75■□□□□ 0.59
Hnf4aP49698 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hnf4aP49698 Gm21956-201ENSMUST00000179946 522 ntBASIC18.75■□□□□ 0.59
Hnf4aP49698 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.75■□□□□ 0.59
Hnf4aP49698 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hnf4aP49698 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hnf4aP49698 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Gm43137-201ENSMUST00000198052 594 ntBASIC18.74■□□□□ 0.59
Hnf4aP49698 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hnf4aP49698 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.73■□□□□ 0.59
Hnf4aP49698 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.73■□□□□ 0.59
Hnf4aP49698 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hnf4aP49698 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.73■□□□□ 0.59
Hnf4aP49698 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hnf4aP49698 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.73■□□□□ 0.59
Hnf4aP49698 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Hnf4aP49698 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hnf4aP49698 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.72■□□□□ 0.59
Hnf4aP49698 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hnf4aP49698 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Hnf4aP49698 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hnf4aP49698 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hnf4aP49698 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.72■□□□□ 0.59
Hnf4aP49698 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.71■□□□□ 0.59
Hnf4aP49698 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hnf4aP49698 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.71■□□□□ 0.59
Hnf4aP49698 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.71■□□□□ 0.59
Hnf4aP49698 Spcs1-204ENSMUST00000226782 949 ntBASIC18.71■□□□□ 0.59
Hnf4aP49698 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hnf4aP49698 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms