Protein–RNA interactions for Protein: P47774

Ccr7, C-C chemokine receptor type 7, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr7P47774 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccr7P47774 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ccr7P47774 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccr7P47774 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccr7P47774 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.32■□□□□ 0.68
Ccr7P47774 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccr7P47774 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr7P47774 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccr7P47774 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccr7P47774 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccr7P47774 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccr7P47774 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr7P47774 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccr7P47774 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Ccr7P47774 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccr7P47774 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccr7P47774 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr7P47774 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccr7P47774 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr7P47774 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccr7P47774 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccr7P47774 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr7P47774 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Ccr7P47774 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccr7P47774 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccr7P47774 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ccr7P47774 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccr7P47774 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr7P47774 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr7P47774 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr7P47774 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.27■□□□□ 0.68
Ccr7P47774 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr7P47774 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccr7P47774 Gm27801-201ENSMUST00000184174 223 ntBASIC19.27■□□□□ 0.68
Ccr7P47774 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr7P47774 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccr7P47774 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr7P47774 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccr7P47774 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr7P47774 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr7P47774 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr7P47774 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr7P47774 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr7P47774 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccr7P47774 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccr7P47774 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccr7P47774 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Ccr7P47774 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.25■□□□□ 0.67
Ccr7P47774 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccr7P47774 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.25■□□□□ 0.67
Ccr7P47774 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr7P47774 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Ccr7P47774 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr7P47774 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr7P47774 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr7P47774 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr7P47774 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms