Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.67■□□□□ 0.58
Sox18P43680 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sox18P43680 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox18P43680 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox18P43680 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox18P43680 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox18P43680 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox18P43680 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Gm6211-202ENSMUST00000167849 925 ntBASIC18.65■□□□□ 0.58
Sox18P43680 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.65■□□□□ 0.58
Sox18P43680 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.65■□□□□ 0.58
Sox18P43680 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox18P43680 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.65■□□□□ 0.58
Sox18P43680 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox18P43680 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox18P43680 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox18P43680 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox18P43680 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Gm13146-201ENSMUST00000118508 780 ntBASIC18.64■□□□□ 0.57
Sox18P43680 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.64■□□□□ 0.57
Sox18P43680 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sox18P43680 Mir6236-201ENSMUST00000184437 123 ntBASIC18.64■□□□□ 0.57
Sox18P43680 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox18P43680 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.64■□□□□ 0.57
Sox18P43680 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sox18P43680 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sox18P43680 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox18P43680 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox18P43680 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Sox18P43680 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.63■□□□□ 0.57
Sox18P43680 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Sox18P43680 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox18P43680 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox18P43680 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox18P43680 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Sox18P43680 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox18P43680 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.61■□□□□ 0.57
Sox18P43680 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sox18P43680 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox18P43680 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.6■□□□□ 0.57
Sox18P43680 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sox18P43680 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.6■□□□□ 0.57
Sox18P43680 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.6■□□□□ 0.57
Sox18P43680 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Sox18P43680 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.6■□□□□ 0.57
Sox18P43680 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.6■□□□□ 0.57
Sox18P43680 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox18P43680 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms