Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Abca1P41233 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Abca1P41233 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Abca1P41233 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.07■□□□□ 0.16
Abca1P41233 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Abca1P41233 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca1P41233 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Gm13148-201ENSMUST00000118892 745 ntBASIC16.06■□□□□ 0.16
Abca1P41233 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.06■□□□□ 0.16
Abca1P41233 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.06■□□□□ 0.16
Abca1P41233 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca1P41233 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.05■□□□□ 0.16
Abca1P41233 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.05■□□□□ 0.16
Abca1P41233 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.05■□□□□ 0.16
Abca1P41233 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Gm7514-201ENSMUST00000209475 934 ntBASIC16.05■□□□□ 0.16
Abca1P41233 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca1P41233 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Abca1P41233 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Abca1P41233 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.04■□□□□ 0.16
Abca1P41233 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca1P41233 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Abca1P41233 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Abca1P41233 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Abca1P41233 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca1P41233 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Abca1P41233 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca1P41233 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca1P41233 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Abca1P41233 Gm10653-202ENSMUST00000139570 835 ntBASIC16.02■□□□□ 0.16
Abca1P41233 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.02■□□□□ 0.16
Abca1P41233 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.02■□□□□ 0.16
Abca1P41233 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca1P41233 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Abca1P41233 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Abca1P41233 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca1P41233 Gm12527-201ENSMUST00000117967 564 ntBASIC16.02■□□□□ 0.15
Abca1P41233 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca1P41233 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Abca1P41233 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca1P41233 Mir5133-201ENSMUST00000174955 77 ntBASIC16.01■□□□□ 0.15
Abca1P41233 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca1P41233 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Abca1P41233 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca1P41233 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.01■□□□□ 0.15
Abca1P41233 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Abca1P41233 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Abca1P41233 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms