Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd9P40240 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd9P40240 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd9P40240 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd9P40240 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Cd9P40240 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.25■□□□□ 0.67
Cd9P40240 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.25■□□□□ 0.67
Cd9P40240 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cd9P40240 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd9P40240 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd9P40240 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
Cd9P40240 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cd9P40240 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd9P40240 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd9P40240 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd9P40240 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd9P40240 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd9P40240 Gm8493-201ENSMUST00000196881 489 ntBASIC19.23■□□□□ 0.67
Cd9P40240 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.23■□□□□ 0.67
Cd9P40240 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cd9P40240 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd9P40240 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd9P40240 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd9P40240 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cd9P40240 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
Cd9P40240 Gm6139-201ENSMUST00000079261 882 ntBASIC19.22■□□□□ 0.67
Cd9P40240 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd9P40240 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd9P40240 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Cd9P40240 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.21■□□□□ 0.67
Cd9P40240 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd9P40240 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd9P40240 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.2■□□□□ 0.66
Cd9P40240 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cd9P40240 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd9P40240 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd9P40240 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd9P40240 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.19■□□□□ 0.66
Cd9P40240 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd9P40240 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.19■□□□□ 0.66
Cd9P40240 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd9P40240 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Cd9P40240 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 Gm11421-201ENSMUST00000122124 294 ntBASIC19.18■□□□□ 0.66
Cd9P40240 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd9P40240 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Cd9P40240 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cd9P40240 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.17■□□□□ 0.66
Cd9P40240 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd9P40240 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms