Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thbs1P35441 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Thbs1P35441 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.95■□□□□ 0.46
Thbs1P35441 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thbs1P35441 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Thbs1P35441 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.95■□□□□ 0.46
Thbs1P35441 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Thbs1P35441 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thbs1P35441 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.94■□□□□ 0.46
Thbs1P35441 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thbs1P35441 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thbs1P35441 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thbs1P35441 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Thbs1P35441 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.93■□□□□ 0.46
Thbs1P35441 Serp2-204ENSMUST00000228055 705 ntBASIC17.93■□□□□ 0.46
Thbs1P35441 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.93■□□□□ 0.46
Thbs1P35441 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.93■□□□□ 0.46
Thbs1P35441 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Thbs1P35441 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thbs1P35441 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thbs1P35441 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Thbs1P35441 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Thbs1P35441 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thbs1P35441 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Thbs1P35441 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thbs1P35441 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Thbs1P35441 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Thbs1P35441 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.91■□□□□ 0.46
Thbs1P35441 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.91■□□□□ 0.46
Thbs1P35441 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.91■□□□□ 0.46
Thbs1P35441 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thbs1P35441 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Iqck-206ENSMUST00000208658 2891 ntBASIC17.9■□□□□ 0.46
Thbs1P35441 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.9■□□□□ 0.46
Thbs1P35441 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.9■□□□□ 0.46
Thbs1P35441 Spcs1-204ENSMUST00000226782 949 ntBASIC17.9■□□□□ 0.46
Thbs1P35441 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.9■□□□□ 0.46
Thbs1P35441 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Thbs1P35441 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thbs1P35441 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.89■□□□□ 0.46
Thbs1P35441 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.89■□□□□ 0.46
Thbs1P35441 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.89■□□□□ 0.45
Thbs1P35441 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.89■□□□□ 0.45
Thbs1P35441 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Thbs1P35441 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thbs1P35441 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thbs1P35441 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thbs1P35441 Gm12821-201ENSMUST00000120022 600 ntBASIC17.88■□□□□ 0.45
Thbs1P35441 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.88■□□□□ 0.45
Thbs1P35441 Gm43137-201ENSMUST00000198052 594 ntBASIC17.88■□□□□ 0.45
Thbs1P35441 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thbs1P35441 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.88■□□□□ 0.45
Thbs1P35441 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms