Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vcam1P29533 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vcam1P29533 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Vcam1P29533 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.59■■□□□ 1.21
Vcam1P29533 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.59■■□□□ 1.21
Vcam1P29533 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.59■■□□□ 1.21
Vcam1P29533 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Vcam1P29533 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vcam1P29533 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vcam1P29533 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Vcam1P29533 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.58■■□□□ 1.21
Vcam1P29533 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Vcam1P29533 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Vcam1P29533 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Vcam1P29533 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vcam1P29533 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Vcam1P29533 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vcam1P29533 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Vcam1P29533 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.57■■□□□ 1.2
Vcam1P29533 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.57■■□□□ 1.2
Vcam1P29533 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vcam1P29533 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vcam1P29533 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Vcam1P29533 Mir5133-201ENSMUST00000174955 77 ntBASIC22.56■■□□□ 1.2
Vcam1P29533 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.56■■□□□ 1.2
Vcam1P29533 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Vcam1P29533 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.56■■□□□ 1.2
Vcam1P29533 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Vcam1P29533 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vcam1P29533 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.55■■□□□ 1.2
Vcam1P29533 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Vcam1P29533 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Vcam1P29533 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Gm6420-201ENSMUST00000193885 723 ntBASIC22.55■■□□□ 1.2
Vcam1P29533 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vcam1P29533 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.54■■□□□ 1.2
Vcam1P29533 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vcam1P29533 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Gm13148-201ENSMUST00000118892 745 ntBASIC22.53■■□□□ 1.2
Vcam1P29533 Gm7860-201ENSMUST00000121190 879 ntBASIC22.53■■□□□ 1.2
Vcam1P29533 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.53■■□□□ 1.2
Vcam1P29533 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Vcam1P29533 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vcam1P29533 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.52■■□□□ 1.2
Vcam1P29533 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.52■■□□□ 1.2
Vcam1P29533 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.52■■□□□ 1.2
Vcam1P29533 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vcam1P29533 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vcam1P29533 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Vcam1P29533 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vcam1P29533 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.51■■□□□ 1.19
Vcam1P29533 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.51■■□□□ 1.19
Vcam1P29533 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Nespas-201ENSMUST00000143738 1083 ntBASIC22.51■■□□□ 1.19
Vcam1P29533 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Vcam1P29533 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Vcam1P29533 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Vcam1P29533 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vcam1P29533 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vcam1P29533 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vcam1P29533 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.5■■□□□ 1.19
Vcam1P29533 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Vcam1P29533 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Vcam1P29533 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Vcam1P29533 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vcam1P29533 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Vcam1P29533 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.49■■□□□ 1.19
Vcam1P29533 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vcam1P29533 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms