Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BrafP28028 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BrafP28028 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BrafP28028 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.91■□□□□ 0.62
BrafP28028 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BrafP28028 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.9■□□□□ 0.62
BrafP28028 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
BrafP28028 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.9■□□□□ 0.62
BrafP28028 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.9■□□□□ 0.62
BrafP28028 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.9■□□□□ 0.62
BrafP28028 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.9■□□□□ 0.62
BrafP28028 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BrafP28028 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.9■□□□□ 0.62
BrafP28028 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BrafP28028 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.89■□□□□ 0.62
BrafP28028 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Golgb1-201ENSMUST00000023534 498 ntBASIC18.89■□□□□ 0.61
BrafP28028 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BrafP28028 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.88■□□□□ 0.61
BrafP28028 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.88■□□□□ 0.61
BrafP28028 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BrafP28028 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
BrafP28028 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BrafP28028 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.87■□□□□ 0.61
BrafP28028 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.87■□□□□ 0.61
BrafP28028 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BrafP28028 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BrafP28028 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.86■□□□□ 0.61
BrafP28028 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
BrafP28028 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Gm9847-201ENSMUST00000052528 599 ntBASIC18.86■□□□□ 0.61
BrafP28028 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.86■□□□□ 0.61
BrafP28028 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.86■□□□□ 0.61
BrafP28028 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BrafP28028 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BrafP28028 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.85■□□□□ 0.61
BrafP28028 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BrafP28028 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
BrafP28028 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.84■□□□□ 0.61
BrafP28028 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.84■□□□□ 0.61
BrafP28028 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
BrafP28028 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BrafP28028 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BrafP28028 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms