Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Aldh1a1P24549 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Aldh1a1P24549 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aldh1a1P24549 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aldh1a1P24549 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Aldh1a1P24549 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aldh1a1P24549 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Mir6982-201ENSMUST00000184354 68 ntBASIC20.96■□□□□ 0.95
Aldh1a1P24549 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aldh1a1P24549 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Aldh1a1P24549 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.95■□□□□ 0.94
Aldh1a1P24549 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Aldh1a1P24549 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aldh1a1P24549 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aldh1a1P24549 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aldh1a1P24549 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.94■□□□□ 0.94
Aldh1a1P24549 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Gm26524-201ENSMUST00000192339 390 ntBASIC20.94■□□□□ 0.94
Aldh1a1P24549 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.94■□□□□ 0.94
Aldh1a1P24549 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.94■□□□□ 0.94
Aldh1a1P24549 Rab3c-203ENSMUST00000224180 967 ntBASIC20.94■□□□□ 0.94
Aldh1a1P24549 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aldh1a1P24549 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Aldh1a1P24549 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.93■□□□□ 0.94
Aldh1a1P24549 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aldh1a1P24549 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.92■□□□□ 0.94
Aldh1a1P24549 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.92■□□□□ 0.94
Aldh1a1P24549 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Gm7977-201ENSMUST00000193787 748 ntBASIC20.91■□□□□ 0.94
Aldh1a1P24549 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aldh1a1P24549 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.9■□□□□ 0.94
Aldh1a1P24549 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Aldh1a1P24549 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Aldh1a1P24549 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aldh1a1P24549 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms