Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6bP23440 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6bP23440 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6bP23440 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.16■□□□□ 0.98
Pde6bP23440 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6bP23440 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6bP23440 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pde6bP23440 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6bP23440 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pde6bP23440 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.15■□□□□ 0.98
Pde6bP23440 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pde6bP23440 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.15■□□□□ 0.98
Pde6bP23440 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Pde6bP23440 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pde6bP23440 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6bP23440 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6bP23440 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6bP23440 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6bP23440 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pde6bP23440 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pde6bP23440 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pde6bP23440 Gm12933-201ENSMUST00000120203 872 ntBASIC21.14■□□□□ 0.97
Pde6bP23440 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.14■□□□□ 0.97
Pde6bP23440 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pde6bP23440 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pde6bP23440 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pde6bP23440 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Pde6bP23440 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pde6bP23440 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pde6bP23440 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.12■□□□□ 0.97
Pde6bP23440 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pde6bP23440 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pde6bP23440 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pde6bP23440 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pde6bP23440 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pde6bP23440 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.11■□□□□ 0.97
Pde6bP23440 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.11■□□□□ 0.97
Pde6bP23440 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pde6bP23440 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pde6bP23440 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pde6bP23440 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pde6bP23440 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Pde6bP23440 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pde6bP23440 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pde6bP23440 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pde6bP23440 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Gm7514-201ENSMUST00000209475 934 ntBASIC21.09■□□□□ 0.97
Pde6bP23440 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.09■□□□□ 0.97
Pde6bP23440 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
Pde6bP23440 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6bP23440 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pde6bP23440 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pde6bP23440 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.08■□□□□ 0.97
Pde6bP23440 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pde6bP23440 Gm27011-201ENSMUST00000182352 972 ntBASIC21.08■□□□□ 0.97
Pde6bP23440 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pde6bP23440 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pde6bP23440 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.08■□□□□ 0.96
Pde6bP23440 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pde6bP23440 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pde6bP23440 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pde6bP23440 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pde6bP23440 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.07■□□□□ 0.96
Pde6bP23440 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.07■□□□□ 0.96
Pde6bP23440 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pde6bP23440 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pde6bP23440 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Pde6bP23440 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pde6bP23440 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6bP23440 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6bP23440 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.06■□□□□ 0.96
Pde6bP23440 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6bP23440 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6bP23440 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6bP23440 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms