Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga1P17095 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga1P17095 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Hmga1P17095 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.04■□□□□ 0.8
Hmga1P17095 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.04■□□□□ 0.8
Hmga1P17095 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hmga1P17095 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.04■□□□□ 0.8
Hmga1P17095 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga1P17095 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Gm38205-201ENSMUST00000192243 258 ntBASIC20.03■□□□□ 0.8
Hmga1P17095 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.03■□□□□ 0.8
Hmga1P17095 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hmga1P17095 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Hmga1P17095 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga1P17095 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga1P17095 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga1P17095 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga1P17095 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga1P17095 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.02■□□□□ 0.8
Hmga1P17095 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Hmga1P17095 Gm7514-201ENSMUST00000209475 934 ntBASIC20.02■□□□□ 0.8
Hmga1P17095 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga1P17095 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmga1P17095 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.02■□□□□ 0.8
Hmga1P17095 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmga1P17095 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmga1P17095 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmga1P17095 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hmga1P17095 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.01■□□□□ 0.79
Hmga1P17095 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Hmga1P17095 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20■□□□□ 0.79
Hmga1P17095 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Hmga1P17095 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hmga1P17095 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20■□□□□ 0.79
Hmga1P17095 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20■□□□□ 0.79
Hmga1P17095 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hmga1P17095 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmga1P17095 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20■□□□□ 0.79
Hmga1P17095 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmga1P17095 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.99■□□□□ 0.79
Hmga1P17095 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmga1P17095 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga1P17095 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hmga1P17095 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga1P17095 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga1P17095 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga1P17095 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hmga1P17095 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga1P17095 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.97■□□□□ 0.79
Hmga1P17095 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmga1P17095 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Hmga1P17095 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmga1P17095 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Hmga1P17095 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga1P17095 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga1P17095 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga1P17095 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.96■□□□□ 0.79
Hmga1P17095 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.96■□□□□ 0.79
Hmga1P17095 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.96■□□□□ 0.79
Hmga1P17095 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.96■□□□□ 0.79
Hmga1P17095 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga1P17095 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga1P17095 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Hmga1P17095 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.95■□□□□ 0.78
Hmga1P17095 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmga1P17095 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmga1P17095 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.95■□□□□ 0.78
Hmga1P17095 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hmga1P17095 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms