Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.43■□□□□ 0.54
Msx1P13297 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Msx1P13297 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msx1P13297 Gm42778-201ENSMUST00000199644 553 ntBASIC18.43■□□□□ 0.54
Msx1P13297 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msx1P13297 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msx1P13297 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msx1P13297 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Msx1P13297 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msx1P13297 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Msx1P13297 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
Msx1P13297 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.42■□□□□ 0.54
Msx1P13297 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.42■□□□□ 0.54
Msx1P13297 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.42■□□□□ 0.54
Msx1P13297 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msx1P13297 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Msx1P13297 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Msx1P13297 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Msx1P13297 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Gm10602-201ENSMUST00000098239 609 ntBASIC18.41■□□□□ 0.54
Msx1P13297 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msx1P13297 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Msx1P13297 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Msx1P13297 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.4■□□□□ 0.54
Msx1P13297 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Msx1P13297 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msx1P13297 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.39■□□□□ 0.54
Msx1P13297 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.39■□□□□ 0.53
Msx1P13297 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msx1P13297 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.39■□□□□ 0.53
Msx1P13297 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.38■□□□□ 0.53
Msx1P13297 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msx1P13297 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Msx1P13297 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Msx1P13297 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Msx1P13297 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.38■□□□□ 0.53
Msx1P13297 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Msx1P13297 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msx1P13297 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.37■□□□□ 0.53
Msx1P13297 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.37■□□□□ 0.53
Msx1P13297 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.37■□□□□ 0.53
Msx1P13297 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Msx1P13297 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msx1P13297 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.36■□□□□ 0.53
Msx1P13297 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Msx1P13297 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msx1P13297 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msx1P13297 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms