Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Fn1P11276 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.21■□□□□ 0.02
Fn1P11276 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fn1P11276 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.21■□□□□ 0.02
Fn1P11276 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Fn1P11276 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Fn1P11276 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Fn1P11276 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.2■□□□□ 0.02
Fn1P11276 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.2■□□□□ 0.02
Fn1P11276 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Fn1P11276 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Fn1P11276 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Fn1P11276 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Fn1P11276 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.2■□□□□ 0.02
Fn1P11276 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.2■□□□□ 0.02
Fn1P11276 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fn1P11276 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fn1P11276 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.19■□□□□ 0.02
Fn1P11276 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Fn1P11276 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.19■□□□□ 0.02
Fn1P11276 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.19■□□□□ 0.02
Fn1P11276 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fn1P11276 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Fn1P11276 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Fn1P11276 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Fn1P11276 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Fn1P11276 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Fn1P11276 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
Fn1P11276 Mir6236-201ENSMUST00000184437 123 ntBASIC15.18■□□□□ 0.02
Fn1P11276 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.18■□□□□ 0.02
Fn1P11276 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.18■□□□□ 0.02
Fn1P11276 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Fn1P11276 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.18■□□□□ 0.02
Fn1P11276 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Fn1P11276 Gm18666-201ENSMUST00000190039 958 ntBASIC15.18■□□□□ 0.02
Fn1P11276 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.18■□□□□ 0.02
Fn1P11276 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Fn1P11276 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fn1P11276 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fn1P11276 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.17■□□□□ 0.02
Fn1P11276 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Fn1P11276 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Fn1P11276 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.17■□□□□ 0.02
Fn1P11276 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fn1P11276 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fn1P11276 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.17■□□□□ 0.02
Fn1P11276 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.16■□□□□ 0.02
Fn1P11276 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Fn1P11276 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Fn1P11276 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fn1P11276 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Fn1P11276 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fn1P11276 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Fn1P11276 Gm5417-201ENSMUST00000079706 384 ntBASIC15.15■□□□□ 0.02
Fn1P11276 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Fn1P11276 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.14■□□□□ 0.01
Fn1P11276 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.14■□□□□ 0.01
Fn1P11276 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.14■□□□□ 0.01
Fn1P11276 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fn1P11276 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms