Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc6P10629 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc6P10629 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc6P10629 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc6P10629 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.75■■□□□ 1.07
Hoxc6P10629 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Hoxc6P10629 Gm6211-202ENSMUST00000167849 925 ntBASIC21.75■■□□□ 1.07
Hoxc6P10629 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc6P10629 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc6P10629 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hoxc6P10629 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hoxc6P10629 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hoxc6P10629 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.74■■□□□ 1.07
Hoxc6P10629 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc6P10629 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc6P10629 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Hoxc6P10629 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc6P10629 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc6P10629 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc6P10629 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc6P10629 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Hoxc6P10629 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hoxc6P10629 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
Hoxc6P10629 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.72■■□□□ 1.07
Hoxc6P10629 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc6P10629 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Hoxc6P10629 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Hoxc6P10629 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc6P10629 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc6P10629 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Hoxc6P10629 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.71■■□□□ 1.07
Hoxc6P10629 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.71■■□□□ 1.07
Hoxc6P10629 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc6P10629 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc6P10629 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxc6P10629 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Hoxc6P10629 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc6P10629 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.7■■□□□ 1.06
Hoxc6P10629 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.7■■□□□ 1.06
Hoxc6P10629 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc6P10629 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hoxc6P10629 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Hoxc6P10629 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc6P10629 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxc6P10629 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Gm13168-201ENSMUST00000121771 632 ntBASIC21.69■■□□□ 1.06
Hoxc6P10629 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.69■■□□□ 1.06
Hoxc6P10629 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Hoxc6P10629 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Hoxc6P10629 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxc6P10629 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.68■■□□□ 1.06
Hoxc6P10629 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.68■■□□□ 1.06
Hoxc6P10629 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.68■■□□□ 1.06
Hoxc6P10629 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.68■■□□□ 1.06
Hoxc6P10629 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxc6P10629 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc6P10629 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Hoxc6P10629 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc6P10629 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc6P10629 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Hoxc6P10629 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.67■■□□□ 1.06
Hoxc6P10629 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hoxc6P10629 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc6P10629 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Hoxc6P10629 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.66■■□□□ 1.06
Hoxc6P10629 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.66■■□□□ 1.06
Hoxc6P10629 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.66■■□□□ 1.06
Hoxc6P10629 Gm37856-201ENSMUST00000191634 999 ntBASIC21.66■■□□□ 1.06
Hoxc6P10629 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc6P10629 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc6P10629 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc6P10629 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc6P10629 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Hoxc6P10629 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc6P10629 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Hoxc6P10629 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 160.7 ms