Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm3807-201ENSMUST00000193520 1168 ntBASIC25.55■■□□□ 1.68
Hoxc9P09633 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Hoxc9P09633 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.54■■□□□ 1.68
Hoxc9P09633 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Hoxc9P09633 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hoxc9P09633 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hoxc9P09633 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hoxc9P09633 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.54■■□□□ 1.68
Hoxc9P09633 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hoxc9P09633 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hoxc9P09633 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.54■■□□□ 1.68
Hoxc9P09633 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.53■■□□□ 1.68
Hoxc9P09633 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.53■■□□□ 1.68
Hoxc9P09633 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Hoxc9P09633 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc9P09633 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Hoxc9P09633 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC25.52■■□□□ 1.68
Hoxc9P09633 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc9P09633 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
Hoxc9P09633 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc9P09633 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc9P09633 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Hoxc9P09633 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Hoxc9P09633 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC25.51■■□□□ 1.67
Hoxc9P09633 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.51■■□□□ 1.67
Hoxc9P09633 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc9P09633 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc9P09633 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc9P09633 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.51■■□□□ 1.67
Hoxc9P09633 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Hoxc9P09633 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Hoxc9P09633 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.5■■□□□ 1.67
Hoxc9P09633 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Hoxc9P09633 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Hoxc9P09633 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hoxc9P09633 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hoxc9P09633 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Hoxc9P09633 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC25.49■■□□□ 1.67
Hoxc9P09633 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hoxc9P09633 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Hoxc9P09633 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Hoxc9P09633 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC25.48■■□□□ 1.67
Hoxc9P09633 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hoxc9P09633 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hoxc9P09633 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC25.48■■□□□ 1.67
Hoxc9P09633 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Hoxc9P09633 Gm6211-202ENSMUST00000167849 925 ntBASIC25.47■■□□□ 1.67
Hoxc9P09633 Gm5408-201ENSMUST00000197998 747 ntBASIC25.47■■□□□ 1.67
Hoxc9P09633 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hoxc9P09633 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hoxc9P09633 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hoxc9P09633 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hoxc9P09633 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Hoxc9P09633 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
Hoxc9P09633 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hoxc9P09633 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hoxc9P09633 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC25.46■■□□□ 1.67
Hoxc9P09633 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hoxc9P09633 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Hoxc9P09633 Gm7860-201ENSMUST00000121190 879 ntBASIC25.45■■□□□ 1.66
Hoxc9P09633 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC25.45■■□□□ 1.66
Hoxc9P09633 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hoxc9P09633 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Hoxc9P09633 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hoxc9P09633 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.44■■□□□ 1.66
Hoxc9P09633 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC25.44■■□□□ 1.66
Hoxc9P09633 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.44■■□□□ 1.66
Hoxc9P09633 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Hoxc9P09633 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Hoxc9P09633 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Hoxc9P09633 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Hoxc9P09633 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Hoxc9P09633 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hoxc9P09633 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.42■■□□□ 1.66
Hoxc9P09633 Gm20760-201ENSMUST00000179197 648 ntBASIC25.42■■□□□ 1.66
Hoxc9P09633 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC25.42■■□□□ 1.66
Hoxc9P09633 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC25.42■■□□□ 1.66
Hoxc9P09633 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Hoxc9P09633 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hoxc9P09633 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hoxc9P09633 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms