Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Col4a2P08122 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a2P08122 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a2P08122 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a2P08122 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Gm26524-201ENSMUST00000192339 390 ntBASIC18.4■□□□□ 0.54
Col4a2P08122 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a2P08122 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col4a2P08122 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Col4a2P08122 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col4a2P08122 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a2P08122 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a2P08122 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.39■□□□□ 0.54
Col4a2P08122 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Col4a2P08122 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 Gm6211-202ENSMUST00000167849 925 ntBASIC18.39■□□□□ 0.53
Col4a2P08122 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col4a2P08122 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a2P08122 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.38■□□□□ 0.53
Col4a2P08122 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.38■□□□□ 0.53
Col4a2P08122 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a2P08122 Gm7290-201ENSMUST00000104990 617 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Gm12918-201ENSMUST00000120234 636 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Gm15710-201ENSMUST00000121821 636 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.37■□□□□ 0.53
Col4a2P08122 Gm5075-201ENSMUST00000196916 622 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col4a2P08122 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col4a2P08122 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col4a2P08122 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.37■□□□□ 0.53
Col4a2P08122 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a2P08122 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a2P08122 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.36■□□□□ 0.53
Col4a2P08122 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a2P08122 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a2P08122 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a2P08122 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Col4a2P08122 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a2P08122 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col4a2P08122 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Col4a2P08122 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.35■□□□□ 0.53
Col4a2P08122 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.35■□□□□ 0.53
Col4a2P08122 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a2P08122 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a2P08122 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a2P08122 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col4a2P08122 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a2P08122 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a2P08122 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a2P08122 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a2P08122 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.33■□□□□ 0.52
Col4a2P08122 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.33■□□□□ 0.52
Col4a2P08122 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a2P08122 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a2P08122 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a2P08122 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.33■□□□□ 0.52
Col4a2P08122 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col4a2P08122 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Col4a2P08122 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a2P08122 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.32■□□□□ 0.52
Col4a2P08122 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.32■□□□□ 0.52
Col4a2P08122 Gm5408-201ENSMUST00000197998 747 ntBASIC18.32■□□□□ 0.52
Col4a2P08122 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a2P08122 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a2P08122 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms