Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
TnfP06804 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
TnfP06804 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TnfP06804 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TnfP06804 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Gm37179-201ENSMUST00000194862 823 ntBASIC20.73■□□□□ 0.91
TnfP06804 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.73■□□□□ 0.91
TnfP06804 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TnfP06804 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TnfP06804 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TnfP06804 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TnfP06804 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.72■□□□□ 0.91
TnfP06804 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.72■□□□□ 0.91
TnfP06804 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TnfP06804 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.71■□□□□ 0.91
TnfP06804 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TnfP06804 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.71■□□□□ 0.91
TnfP06804 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.71■□□□□ 0.91
TnfP06804 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TnfP06804 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TnfP06804 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TnfP06804 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
TnfP06804 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TnfP06804 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.7■□□□□ 0.9
TnfP06804 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Gm29257-201ENSMUST00000186115 639 ntBASIC20.7■□□□□ 0.9
TnfP06804 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TnfP06804 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TnfP06804 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TnfP06804 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.69■□□□□ 0.9
TnfP06804 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.69■□□□□ 0.9
TnfP06804 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TnfP06804 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.69■□□□□ 0.9
TnfP06804 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.68■□□□□ 0.9
TnfP06804 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.68■□□□□ 0.9
TnfP06804 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TnfP06804 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.67■□□□□ 0.9
TnfP06804 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.67■□□□□ 0.9
TnfP06804 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.67■□□□□ 0.9
TnfP06804 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.67■□□□□ 0.9
TnfP06804 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TnfP06804 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TnfP06804 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TnfP06804 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.66■□□□□ 0.9
TnfP06804 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TnfP06804 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TnfP06804 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
TnfP06804 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms