Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.23■□□□□ 0.67
Hoxa4P06798 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa4P06798 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa4P06798 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa4P06798 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa4P06798 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa4P06798 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.23■□□□□ 0.67
Hoxa4P06798 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hoxa4P06798 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hoxa4P06798 Gm18284-201ENSMUST00000172604 624 ntBASIC19.22■□□□□ 0.67
Hoxa4P06798 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hoxa4P06798 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxa4P06798 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hoxa4P06798 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa4P06798 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hoxa4P06798 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.21■□□□□ 0.67
Hoxa4P06798 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Hoxa4P06798 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa4P06798 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa4P06798 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.2■□□□□ 0.66
Hoxa4P06798 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa4P06798 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa4P06798 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxa4P06798 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Hoxa4P06798 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hoxa4P06798 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa4P06798 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
Hoxa4P06798 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxa4P06798 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxa4P06798 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.19■□□□□ 0.66
Hoxa4P06798 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.19■□□□□ 0.66
Hoxa4P06798 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxa4P06798 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa4P06798 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.18■□□□□ 0.66
Hoxa4P06798 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa4P06798 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa4P06798 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Gm8495-201ENSMUST00000188740 694 ntBASIC19.17■□□□□ 0.66
Hoxa4P06798 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
Hoxa4P06798 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.17■□□□□ 0.66
Hoxa4P06798 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hoxa4P06798 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hoxa4P06798 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa4P06798 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa4P06798 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa4P06798 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxa4P06798 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa4P06798 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hoxa4P06798 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.16■□□□□ 0.66
Hoxa4P06798 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa4P06798 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.16■□□□□ 0.66
Hoxa4P06798 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa4P06798 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.15■□□□□ 0.66
Hoxa4P06798 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.15■□□□□ 0.66
Hoxa4P06798 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxa4P06798 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms